Magle's father died in 1996, shortly before the first performance of Frederik Magle's Christmas cantata A newborn child, before eternity, God!, which is dedicated to him. Magle was awarded the Freemason's Arts Prize in 2001. In 2006 he took ownership of the classical music internet forum "Talk Classical".
The Christmas cantata A newborn child, before eternity, God! was given its first performance in 1996, commissioned by Kulturby 96 – the European Capital of Culture 1996. In 1997 it was released on CD, in a recording made in Messiaskirken in Charlottenlund by the soloists Ingibjörg Gudjonsdottir, soprano, Elisabeth Halling, alto, Gert Henning-Jensen, tenor, Christian Christiansen, bass, two mixed choirs, two children's choirs, brass band, organ and percussion, conducted by Steen Lindholm. The cantata was described by the reviewer of Jyllands-Posten as hard to classify, with a "religiously narrative robustness". The work sets text from a kontakion by the 6th century hymnographer Romanos the Melodist, translated into Danish by the theology professor Christian Thodberg, and edited by the priest Kristian Høeg.